Let $y$ be a variable not occuring at all in $\phi(x)$. Then we have $$\forall x\;\phi(x)\vdash\phi(y)$$ per _Universal Instantiation_ and then $$\phi(y)\vdash\exists x\;\phi(x)$$ (because $x$ does not occur in $\phi(y)$) per _Existential Generalization_.
How come we don't even need $\exists x\;x=x$? Well, the rules of inference already incorporate that our universe of discourse is nonempty (variables are not of type "pink unicorn").