If $"\varinjlim" \alpha$ and $"\varinjlim"\beta$ are two Ind-objects over a category $C$ then they are in particular contravariant functors from $C$ to $Set$. Actually we define the category $Ind(C)$ as a full subcategory of $C^{\wedge}=Fct(C^{op},Set)$ with ind-objects as objects and natural transformations as morphisms.
Hence $"\varinjlim" \alpha$ and $"\varinjlim"\beta$ are isomorphic if there are natural transformations $F : "\varinjlim" \alpha \to "\varinjlim"\beta$ and $G : "\varinjlim" \beta \to "\varinjlim"\alpha$ which are inverses of each other.