I would structurally translate this as:
>
>
> There are times when the water will flow, even if it is the case where there is nobody (here).
The N+ construction expresses the same as V+, adj+ adj, which indicates a 'reverse condition', usually translated to "even if" \- i.e. explaining a scenario which is contrary to what you might think. Usually, I suppose, a urinal's flushing feature only activates after use, by using one of those infra-red sensors; this is simply explaining that they may also (surprisingly) activate as a matter of course, without a person needing to use it/be there to trigger it.
is often used in a related way, in "no matter the case" type phrases, with :
> No matter the situation (case), I was smiling.
>
> This rule applies in all cases.
>
> (Whatever the case) you should never judge people by the colour of their skin.